Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51879g00001 ATGCTTACTTGTTTTCAGACTTCTTGTATTTCGTCGGCTATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAATTCAATTAACCAGACAATTGGTTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATATATCCACCTACCTTGAAATCTAGTCCTGATGCACCCAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACAAGCAATGAGAAAATCATGACTGCTACTTTGTTTCTTACG 309 0.4142 MLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTSNEKIMTATLFLT 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51879g00001 103 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 1 103 IPR030676 -
Trme51879g00001 103 Pfam Sodium:sulfate symporter transmembrane region 1 99 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51879g00001 Trme-Chr51879 583 891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51879g00001 1 103 Antiporters AT5G12860 80.583 1.87e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51879g00001 - - gmx:100796365 178.333