Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51868g00001 CAAAACCAAAGGTCATCACTGGATTGGARTAAGCGTTTTGAAATTATTTGCGGGATTGCTCGAGGTGTTTTATATCTACATCAAGATTCAAGGCTKAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACACAGAGAGTGGTTGGAACATATGGATATATGTCACCAGAATATGCTATGGAAGGATGTTATTCAACAAAATCTGATGTCTACAGTTATGGTGTCTTACTTCTGGAGATTATTGCTGGCCAAAGAAACACATATCGTGAAACAGGAAGAGCCTCCTCAAATTTAATTGGACATGTGTGGACACTCTGGACAGAAGGAAAGGCCTTGGATATAGTTGATCCAACACTAAACCAGTCATATCCTACTGCTATGGTTCTGAGATGCATTCAAATTGGACTTTTGTGTGCGCAAGAAAATGCCACGAATAGACCATCAATGTTAGAAGTTGTTTTCATGCTATGC 555 0.3838 QNQRSSLDWXKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTQRVVGTYGYMSPEYAMEGCYSTKSDVYSYGVLLLEIIAGQRNTYRETGRASSNLIGHVWTLWTEGKALDIVDPTLNQSYPTAMVLRCIQIGLLCAQENATNRPSMLEVVFMLC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51868g00001 185 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 185 - -
Trme51868g00001 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme51868g00001 185 SUPERFAMILY Protein kinase-like (PK-like) 3 182 IPR011009 -
Trme51868g00001 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 34 46 IPR008271 GO:0004672|GO:0006468
Trme51868g00001 185 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Trme51868g00001 185 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 185 - -
Trme51868g00001 185 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme51868g00001 185 Pfam Protein tyrosine and serine/threonine kinase 3 181 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51868g00001 Trme-Chr51868 209 942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51868g00001 3 184 Receptor kinase-like Gene Family AT4G11530 59.563 2.00e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme51868g00001 PK_Tyr_Ser-Thr 4.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51868g00001 - - tpra:123914661 353.599