Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme518488g00001 ATGGCAATCCTTGCAAGCCATCACGAAGGCAGGATAGCAATCAGTCAGGCCGATCCAATCCCTATTTTAGTTGAGGTTATACGAACCGGATCACCGCGTAACCGGGAGAATGCTGCTGCTGTTTTGTGGTCAGTATGCACAGGAGATTTCCTGCAATTGAAACTAGCAAAGGAACATGGAGCAGTAGAAGCACTTCAGGGATTATCAGAAAATGGAACTGATAGAGCTAAGAGAAAAGCTGGAAGTAT 248 0.4556 MAILASHHEGRIAISQADPIPILVEVIRTGSPRNRENAAAVLWSVCTGDFLQLKLAKEHGAVEALQGLSENGTDRAKRKAGS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme518488g00001 82 PANTHER U BOX DOMAIN-CONTAINING 2 80 - -
Trme518488g00001 82 SUPERFAMILY ARM repeat 4 74 IPR016024 -
Trme518488g00001 82 Gene3D - 1 82 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme518488g00001 Trme-Chr518488 1 248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme518488g00001 1 82 U-box Gene Family AT3G54850 62.195 1.44e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme518488g00001 - - gmx:100777452 147.132