Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51730g00001 GTTGATAGTATGTTAGGGAGACGTGAAAATCCCGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTACGTACAAAAGATAGAGAGCGTGTACTTGTTCTTGCTGCCACAAATAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCGCGAAGATTGATGGTTAATTTGCCAGATGCAGCAAACAGAGCAAAAATTATGAGAGTCATTTTAGCAAAAGAAGATTTGGCGGCTGATGTTGATTTAGAAGCATTAGCAAATATGACTGATGGATACTCTGGAAGTGACCTAAAGAATCTTTGTGTCACAGCAGCGCACTGTCCAATACGAGAGATCTTGGAGAAGGAAAAAAAGTTGAGTGCTGATTGA 399 0.4085 VDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAANRAKIMRVILAKEDLAADVDLEALANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKLSAD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51730g00001 132 Gene3D - 1 67 IPR027417 -
Trme51730g00001 132 Pfam ATPase family associated with various cellular activities (AAA) 1 65 IPR003959 GO:0005524|GO:0016887
Trme51730g00001 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 125 IPR027417 -
Trme51730g00001 132 ProSitePatterns AAA-protein family signature. 39 58 IPR003960 GO:0005524|GO:0016887
Trme51730g00001 132 Gene3D - 68 127 - -
Trme51730g00001 132 Pfam AAA+ lid domain 89 124 IPR041569 -
Trme51730g00001 132 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51730g00001 Trme-Chr51730 52 832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51730g00001 1 130 Calmodulin-binding Proteins AT3G56690 31.579 1.59e-11 58.5