Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51651g00001 ATGCAGGGATGTGATGCATCAGTATTGTTAGACGACACRGCAAATTTCACAGGTGAAAAGAATTCATTCCCAAATGCAAACTCTCTAAGGGGTTTTGAGGTAATTGATGACATCAAATCTCAATTGGAGACTATGTGTCCCAATGTTGTCTCTTGTGCTGACATCTTAGCCCTTGCTGCCAGGGACTCTGTTGCTGAGCTTGGTGGACAAAGATGGAATGTACCATTAGGCAGAAGAGATTCGTTAACAGCAAGCTTAGATCAAGCAAATTCTGACTTACCTGCTCCCTTTTTGGATCTTGATGGCCTTATCGCTGGATTCCAAAAGAAAAATTTCACAGCCGAAGAAATGGTTACATTATCAG 364 0.4176 MQGCDASVLLDDTANFTGEKNSFPNANSLRGFEVIDDIKSQLETMCPNVVSCADILALAARDSVAELGGQRWNVPLGRRDSLTASLDQANSDLPAPFLDLDGLIAGFQKKNFTAEEMVTLS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51651g00001 121 PRINTS Haem peroxidase superfamily signature 116 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 Pfam Peroxidase 2 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 FunFam Peroxidase 2 102 - -
Trme51651g00001 121 Gene3D - 2 93 - -
Trme51651g00001 121 PANTHER PEROXIDASE 72-RELATED 2 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Plant peroxidase signature 115 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 ProSiteProfiles Plant heme peroxidase family profile. 1 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 SUPERFAMILY Heme-dependent peroxidases 2 121 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme51651g00001 121 Gene3D Peroxidase, domain 2 94 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51651g00001 Trme-Chr51651 75 566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51651g00001 1 121 Peroxidase AT5G05340 59.504 3.20e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51651g00001 K00430 - gmx:100802244 200.29