Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51421g00001 ATGTTCAATACACCACCACCTTATCTCTATCTCAAAAACCAATTAACTCCATCACTATGTTCTCTGCATTTTTCCGATGATTCAACCTCATTTGCAGTCTCTTACCTCATCAACAATCTTGGGTTTTCCCCACAATCTGCTTCCAAACTTTGTTCCACTTACAATTTTAGTTTCAAGACTGCCCAAAACCCTGATTCTGTTCTCAACGTCTTTAGAAACCATGGTTTCTCAGATTTCCAACTTCGTCATATCATTACCAAGTTACCAGAGTTACTTTCCTGCAACCCCTCCAAAAGGGTGTTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCCTCTAACTCTGACATTGTTAACCTTGTCAGTAAGAACCCCAGATTCTTGACTCGAAGCCTGGAGAATCATATAATCCCAACCTATGAATTGTTGTATAGATTCTTGCAATCAGAAGAGGACACTGTTGCTCTTGCAATTCACAAAATATATTTACTTAGTCACGATCCTGTGCCAAATAACATCACAATGTTGGTTGAGAATGGAGTGAGGGACTCAACCATTGCAAGATTGCTTCAGTCGCAATTTCGG 585 0.3966 MFNTPPPYLYLKNQLTPSLCSLHFSDDSTSFAVSYLINNLGFSPQSASKLCSTYNFSFKTAQNPDSVLNVFRNHGFSDFQLRHIITKLPELLSCNPSKRVLPKFQFLLSKGASNSDIVNLVSKNPRFLTRSLENHIIPTYELLYRFLQSEEDTVALAIHKIYLLSHDPVPNNITMLVENGVRDSTIARLLQSQFR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51421g00001 195 Pfam mTERF 68 193 IPR003690 GO:0003690|GO:0006355
Trme51421g00001 195 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Trme51421g00001 195 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Trme51421g00001 195 PANTHER CGI-12 PROTEIN-RELATED 28 193 IPR003690 GO:0003690|GO:0006355
Trme51421g00001 195 Gene3D Transcription termination factor 3, mitochondrial 53 195 IPR038538 -
Trme51421g00001 195 FunFam Uncharacterized protein 28 169 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme51421g00001 mTERF 6.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51421g00001 K15031 - gmx:102663414 183.341