Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme513g00001 TTGTATATGGCTCCTTTCTCTGATAGGGACAGATATTACAGTAACATTGGCTTTTGGTCCAATGTCGATGGAATTAACATGTCTGTTTTAATTCCATCGGCGAAGACTTGTTTCTGTAGTAGTCCTAAAGTAGAGACAGTTGAGCTGGCCAGTCTTTTGGCAGACCCTCATCAGGTGATAGAGGTAGACATGCACTCGATTAGTAGTTCTGATTTGGATTCTATCAGCACAGCTTTTGAGTTCCACTCATATAGGAGTGCACCACTACATGGGTTTGCACTTTGGTTTGATACTAGATTTTCCCGGCTACCACGAGTCATGCCTGGAGCACCCATTCTATCTACTGCTCCTAGTGCACCATCGACACATTGGCAGCAGACGTTGCTAGATTGTGAGGATCCAATTGATCTAGAAGAAGATCAAGTGATTCTAGGATCATTAGAGATTAAGATTGACAGATACTACCCTCGGATTCTGCATATAGATCTTTCATATGGGTTAAAGGGTGGTGAATTGTCTAAGATCAAGACAAGTTTCTGA 540 0.4222 MYMAPFSDRDRYYSNIGFWSNVDGINMSVLIPSAKTCFCSSPKVETVELASLLADPHQVIEVDMHSISSSDLDSISTAFEFHSYRSAPLHGFALWFDTRFSRLPRVMPGAPILSTAPSAPSTHWQQTLLDCEDPIDLEEDQVILGSLEIKIDRYYPRILHIDLSYGLKGGELSKIKTSF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme513g00001 179 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 169 IPR029063 -
Trme513g00001 179 Gene3D - 1 178 - -
Trme513g00001 179 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 166 IPR025799 GO:0016274|GO:0018216
Trme513g00001 179 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 157 IPR025799 GO:0016274|GO:0018216
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme513g00001 1 146 C2H2 Transcription Factor Family AT3G12270 28.667 7.17e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme513g00001 K11437 - oeu:111395412 145.976