Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme51381g00001 | ATGCGTGGCAGATCCCCATATGATCAGAACGGTCGATTAATATTGGAGGAAGGTTACCTTGTCTATGAATGTAACCGTATGTGCAGATGCAATAAATCCTGTCCAAATAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACGGAGAAAAAGGGATGGGCAGTAAGGGCTGGAGAAGCTATTCTACGAGGAACATTTGTGTGCGAATACATAGGAGAGGTTTTAGATGTGCAGGAGGCACACAACAGACGCGAAAGATATGACACAACGAATAGCAGTTATTTCTATGACATCAATGCTCGTGTTAATGATATGAGTAGATTGATTGAGGAACAAGTCCAATATGTGATTGATGCTACTAAAAATGGAAATGTGTCGAGGTTCATCAATCATAG | 407 | 0.4029 | MRGRSPYDQNGRLILEEGYLVYECNRMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEAHNRRERYDTTNSSYFYDINARVNDMSRLIEEQVQYVIDATKNGNVSRFINH | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme51381g00001 | 135 | ProSiteProfiles | SET domain profile. | 45 | 135 | IPR001214 | GO:0005515 | |
| Trme51381g00001 | 135 | Pfam | Pre-SET motif | 5 | 37 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
| Trme51381g00001 | 135 | Gene3D | SET domain | 1 | 135 | IPR046341 | - | |
| Trme51381g00001 | 135 | Pfam | SET domain | 56 | 135 | IPR001214 | GO:0005515 | |
| Trme51381g00001 | 135 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 1 | 135 | - | - | |
| Trme51381g00001 | 135 | SUPERFAMILY | SET domain | 3 | 135 | IPR046341 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme51381g00001 | Trme-Chr51381 | 20 | 865 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme51381g00001 | 1 | 135 | C2H2 Transcription Factor Family | AT2G23740 | 65.185 | 1.62e-59 | 196 |
Transcription factors information