Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5130g00001 ATGGTGCTCATCTTAGACCAAACAGGAATCAAGGAACTACCTTCATCCTTGTACGATTTGGTCGGACTTCAAGTGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCATGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTTCCNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTCAATGCTGAAGACTTTCCCAGAGATCTTGGAGCCTGCTGAAACGTTTGTTCACATTAACTTAACAAAAACAGCGATTAAGGAACTGCCTTCATCTTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTCAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAAT 411 0.365 MVLILDQTGIKELPSSLYDLVGLQVLSLRYCQKLEIIPSSIGSHGKLSKLDLTFCESLETFPXXXXXXXXXXXXXXXXSMLKTFPEILEPAETFVHINLTKTAIKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5130g00001 137 Gene3D Ribonuclease Inhibitor 73 137 IPR032675 -
Trme5130g00001 137 Gene3D Ribonuclease Inhibitor 1 71 IPR032675 -
Trme5130g00001 137 SUPERFAMILY L domain-like 3 136 - -
Trme5130g00001 137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5130g00001 Trme-Chr5130 1 411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5130g00001 3 134 WRKY Transcription Factor Family AT4G12020 31.111 3.32e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5130g00001 - - tpra:123918425 177.948