Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51307g00001 AATGTTCAGATTCTGAAAGAATTTCTTAGTGACGCTGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATGCCAATGTGGGTAGAAATGCAGATGCATTAGCGTCATACTTCGGAGAAGACCCAGCACGTTGCCCATTTGAACAAGGTAAATAA 153 0.4248 NVQILKEFLSDAEAEVRSLAQLYANVGRNADALASYFGEDPARCPFEQGK 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51307g00001 50 Gene3D Formin, FH2 domain 1 49 IPR042201 -
Trme51307g00001 50 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 48 - -
Trme51307g00001 50 PANTHER FORMIN-J 3 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51307g00001 Trme-Chr51307 2 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51307g00001 3 48 Protein tyrosine phosphatase (PTP) family AT5G58160 76.087 1.12e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51307g00001 - - tpra:123915978 94.3597