Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5125g00001 ATGACAGTTGGAACTCTTGCACCAAAGGCAGAGAGTAAGAAACCAAGGAAGAAGAAGGAAATTGTTGATGAGAATGCGCCTTTGTTACCTAAGACTCAAGAAACAGATGCTGAGTTCCATGAATTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCTTGCGTCAAAAAGTTGGGAATGGTGCCTGGTCTTCTAGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATACGGAAAAGCTTCGGTAGAGTTATCTATTGTAATCGGTAACATTGGTATTCTGATTGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATGCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTATTGTTTTCACAACACTCGCTGTGTTTGCACCTTTGGTCAGCCTCAAGCGAATTG 583 0.4271 MTVGTLAPKAESKKPRKKKEIVDENAPLLPKTQETDAEFHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKASVELSIVIGNIGILIVYMIIIGDVISGTTSSGIHHAGILEGWFGVHWWTGRTFVIVFTTLAVFAPLVSLKRI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5125g00001 194 PANTHER AMINO ACID TRANSPORTER 40 194 - -
Trme5125g00001 194 Pfam Transmembrane amino acid transporter protein 45 190 IPR013057 -
Trme5125g00001 194 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5125g00001 Trme-Chr5125 70 767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5125g00001 18 194 Amino Acid or Auxin Permease AAAP Family AT5G38820 59.444 1.20e-71 222