Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51243g00001 ATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCTGAGACCCTATATCTGACAGTGACACTGTTGGATCAATATCTTTCCCAAGTGAACATAAAAACAAGTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAATATGAGGACTTTTGGCACCCAAGGGTAAAAGATTTGATTAGCATCTCAGCCGAGTCGTATACTAGAGATCAAATGCTTGGAATGGTAGGCAATTCTTATATTCTTATAATAAGCATTTCATAG 324 0.3827 MSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVNIKTSDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMVGNSYILIISIS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51243g00001 107 Gene3D - 1 99 - -
Trme51243g00001 107 SMART cyclin_7 17 101 IPR013763 -
Trme51243g00001 107 FunFam Cyclin N-terminal domain containing 2 1 102 - -
Trme51243g00001 107 PANTHER CYCLINS 2 95 IPR039361 -
Trme51243g00001 107 Pfam Cyclin, N-terminal domain 2 95 IPR006671 -
Trme51243g00001 107 SUPERFAMILY Cyclin-like 2 95 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51243g00001 Trme-Chr51243 74 676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51243g00001 1 95 Core Cell Cycle Gene Families AT1G16330 73.684 1.93e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51243g00001 K21777 - tpra:123899654 192.2