Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme51198g00001 | ATGTCTGCAGTCCCCAAATTCCTCCTGGATGGCACTTACCAGGGCGGTGCATATACTTTTTGTGACCATCATCATCACCCTGATCCTTCTATTGATGATGATGAATCAAAATTACTTATTCCTCATATGTTTATACCTCCCTGTCTGATTGATTTTGCGAAGGAGATGATTTCTAAGTCCGATGATAAAACCGTTCTGGCAACCTACATCTCTGATGATTTAAAGAAGGACTCTGATTTGCTTCAGCTTTTCAAGTCTAAGTCTAAGGGTGATGTGAAAAGTGCCAATCTTGCTATTGATCAAGAAACTGGATTTAGTGGGAATTTTGGCTTTGTTACCTTTGTCACCAAGGAAGATGCTCACAAGGCTATTCAAGAACTCAATGGTCTTGTGCATGGCGACAAAAGAACCATGACCATGAGCGTTGATTGGGCCATCCCAAGAACAGCCTAA | 453 | 0.415 | MSAVPKFLLDGTYQGGAYTFCDHHHHPDPSIDDDESKLLIPHMFIPPCLIDFAKEMISKSDDKTVLATYISDDLKKDSDLLQLFKSKSKGDVKSANLAIDQETGFSGNFGFVTFVTKEDAHKAIQELNGLVHGDKRTMTMSVDWAIPRTA | 150 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme51198g00001 | 150 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 63 | 147 | IPR000504 | GO:0003723 | |
Trme51198g00001 | 150 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 77 | 148 | - | - | |
Trme51198g00001 | 150 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 77 | 135 | IPR000504 | GO:0003723 | |
Trme51198g00001 | 150 | SUPERFAMILY | RNA-binding domain, RBD | 61 | 148 | IPR035979 | GO:0003676 | |
Trme51198g00001 | 150 | Gene3D | - | 51 | 150 | IPR012677 | - | |
Trme51198g00001 | 150 | SMART | rrm1_1 | 64 | 141 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme51198g00001 | Trme-Chr51198 | 377 | 829 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme51198g00001 | 44 | 149 | Eukaryotic Initiation Factors Gene Family | AT5G06000 | 35.714 | 9.94e-17 | 73.2 |