Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme51135g00001 | ATGTCCTCTCTCCAGTGCAGTATACTGAAGATCTCCGTCACAAATGCTTCTAATGATCCAACAAAAGGTGCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCGAAAACCAAGAACAAGGATGAATTTGATCCATTAATTGTAATCCTTCACGGAGGGCCACAAGACGTGTCTTTGTCACACTTCTCGAAGTCTTGGGCGTTTCTATCTTCAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTACAATCTCTTCCAGGGAAAGTTGGATCTCAGGATGTGAACGATGTTCTCTCTGCGATAGATCATGTGATCAACTTGGGTCTTGCTAGTCCGTCCAAGATT | 375 | 0.4187 | MSSLQCSILKISVTNASNDPTKGAAKPFEAIFVSSKTKNKDEFDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKI | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme51135g00001 | 125 | Pfam | Prolyl oligopeptidase family | 61 | 125 | IPR001375 | GO:0006508|GO:0008236 | |
| Trme51135g00001 | 125 | SUPERFAMILY | alpha/beta-Hydrolases | 39 | 125 | IPR029058 | - | |
| Trme51135g00001 | 125 | PANTHER | SERINE PEPTIDASE S9 FAMILY MEMBER | 1 | 125 | - | - | |
| Trme51135g00001 | 125 | Gene3D | alpha/beta hydrolase | 10 | 125 | IPR029058 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme51135g00001 | Trme-Chr51135 | 1 | 782 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme51135g00001 | 41 | 125 | Carbohydrate Esterase | AT5G36210 | 30.588 | 2.29e-08 | 49.3 |