Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme51113g00001 | GATGCTAAACTCTGCCAACTTCTCGATGAATTCACCCAAATCCTTGTTGTTAATGCTGACAATGTTGGATCAAATCAGTTACAGAGTATTCGTAGAGGTTTACGTGGTGACTCAATTGTTCTCATGGGGAAGAATACCATGATGAAACGTTCTGTTCGTATTCATGCTGACAAAACTGGAAACAATGCTTTTCTTAACCTCATTCCTCTTCTTGTCGGAAATGTTGGTTTGATTTTCACAAAAGGTGACTTGAAGGAAGTTAGCGAAGAGGTTGCTAAGTACAAGACTAACTCAGATTGA | 300 | 0.39 | DAKLCQLLDEFTQILVVNADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSVRIHADKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKTNSD | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme51113g00001 | 99 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P0 | 1 | 97 | - | - | |
| Trme51113g00001 | 99 | Gene3D | - | 1 | 99 | IPR043141 | - | |
| Trme51113g00001 | 99 | SUPERFAMILY | Ribosomal protein L10-like | 3 | 95 | IPR043141 | - | |
| Trme51113g00001 | 99 | Pfam | Ribosomal protein L10 | 3 | 94 | IPR001790 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme51113g00001 | Trme-Chr51113 | 1 | 948 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme51113g00001 | 1 | 98 | Cytoplasmic Ribosomal Protein Gene Family | AT2G40010 | 83.673 | 4.31e-56 | 174 |