Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51113g00001 GATGCTAAACTCTGCCAACTTCTCGATGAATTCACCCAAATCCTTGTTGTTAATGCTGACAATGTTGGATCAAATCAGTTACAGAGTATTCGTAGAGGTTTACGTGGTGACTCAATTGTTCTCATGGGGAAGAATACCATGATGAAACGTTCTGTTCGTATTCATGCTGACAAAACTGGAAACAATGCTTTTCTTAACCTCATTCCTCTTCTTGTCGGAAATGTTGGTTTGATTTTCACAAAAGGTGACTTGAAGGAAGTTAGCGAAGAGGTTGCTAAGTACAAGACTAACTCAGATTGA 300 0.39 DAKLCQLLDEFTQILVVNADNVGSNQLQSIRRGLRGDSIVLMGKNTMMKRSVRIHADKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKTNSD 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51113g00001 99 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 97 - -
Trme51113g00001 99 Gene3D - 1 99 IPR043141 -
Trme51113g00001 99 SUPERFAMILY Ribosomal protein L10-like 3 95 IPR043141 -
Trme51113g00001 99 Pfam Ribosomal protein L10 3 94 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme51113g00001 Trme-Chr51113 1 948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51113g00001 1 98 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 83.673 4.31e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51113g00001 K02941 - jre:108980032 176.792