Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50987g00001 GCAAAAAGACTGAGAGCTACACCAGGAGTGAAGTTGGTAGAGAAAGACAGAGGAGTGAAACTAATGACAACATACACTCCTGATTTTCTTAAGTTACCACAAGGAGTATGGGCACAAGAAGGAGGAGGAGAAAAAAATGCAGGTGATGGAGTTGTTATTGGTGTTATTGACAGTGGCATTAATCCACTTCATCCAAGTTTTGGTTCTCAACTTTTCACTTCAAATGTCTCTCACTTTTCTGGTGCTTGTATGACTGGTCCACACTTTCCACCTGGTTCTTGCAATGGAAAGATTATTTCTGCTAAATATTTTTCATCTGGTGCTCAAGCTAGTGCTACCTTTAATGCTTCTGTGGATATTCTTTCACCCTATGATGCTGATGGACATGGCAGTCATGTGTCATCTATTGCTGCTGGAAATGCTGATGTTCCTGTTATAGTGAATGGTTTTTGCTATGGACGAGCCAGCGGAATGGCACCGCGTGCAAGGATTGCTGTTTATAAGGCTATCTATCCATCTGTGGGAACTCTAGCAGATGTTGTCGCAGCTATCGATCAAGTAAGTTTCCATTCCGTTCTCACGCTAATTATATTCATCAAGCAACTCAAATAA 612 0.415 AKRLRATPGVKLVEKDRGVKLMTTYTPDFLKLPQGVWAQEGGGEKNAGDGVVIGVIDSGINPLHPSFGSQLFTSNVSHFSGACMTGPHFPPGSCNGKIISAKYFSSGAQASATFNASVDILSPYDADGHGSHVSSIAAGNADVPVIVNGFCYGRASGMAPRARIAVYKAIYPSVGTLADVVAAIDQVSFHSVLTLIIFIKQLK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50987g00001 203 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 53 64 IPR023827 -
Trme50987g00001 203 Gene3D Peptidase S8/S53 domain 23 194 IPR036852 GO:0004252|GO:0006508
Trme50987g00001 203 PRINTS Subtilisin serine protease family (S8) signature 48 67 IPR015500 -
Trme50987g00001 203 PRINTS Subtilisin serine protease family (S8) signature 125 138 IPR015500 -
Trme50987g00001 203 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 186 IPR045051 -
Trme50987g00001 203 ProSitePatterns Serine proteases, subtilase family, histidine active site. 129 139 IPR022398 -
Trme50987g00001 203 ProSiteProfiles Serine proteases, subtilase domain profile. 27 203 - -
Trme50987g00001 203 Pfam Subtilase family 48 186 IPR000209 GO:0006508|GO:0008236
Trme50987g00001 203 SUPERFAMILY Subtilisin-like 2 188 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50987g00001 Trme-Chr50987 195 897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50987g00001 1 195 Subtilisin-like Serine Gene Family AT1G62340 66.667 2.18e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50987g00001 - - psat:127138335 327.02