Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50974g00001 ATGTCAGGTACATCAATGTCATGTCCTCATGCTAGTGGAATTGCAGCTCTTATCCGTTCCGCTCACAAAAAATGGAGCCCTGCAGCTATCAAATCTGCAATGATGACAACAGCAGATGTAATTGACCACACAGGAAGACCGATACTYGATGAAGACAAACCAGCTACTTCTTTTGCAATGGGAGCTGGAAATGTGAATCCAAAAAGAGCATTAAATCCCGGACTTATATACGATATTAAACCAGATGATTATGTCAACCACCTATGCAGCATTGGTTATACAAAGTCAGAAATATTCAGTGTCACACACCGAAACGTAAGCTGTCATGCAATCATGCAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCAATCTTAGTAATATTTACCGACGGAATGAGAAGAAAAATGTTTAGCAGGAGGGTAACAAATGTGGGAAGTCCTAACTCCATCTACTCAGTGAAGGTTATGGCACCTCAAGGAGTAAAAGTGATAGTGAAACCCAAGAAACTAGTATTCAAACAAATAAATCAAAGCTTGAGCTATAGGGTTTGGTTCATATCAAGAAAACGGGTCAAAAAAGGCGACGATAGCATGAACTTTGCAGAAGGACATTTGACATGGATACACTCACAAAATGTTCATGTTAGCGGACTGAGTTCTTTTTATTTTGATTTGTGGTCGAGAAGTGTGGCGCTTAAGGATAAGTTTGGTAGAGTCTTTAGTTTATCCGGTAACAAGCTGGTATTAGTTGATGATGTGTTTAAATCTGGAGTTGGATTGAGCGGTGGGAGTTAG 798 0.3997 MSGTSMSCPHASGIAALIRSAHKKWSPAAIKSAMMTTADVIDHTGRPILDEDKPATSFAMGAGNVNPKRALNPGLIYDIKPDDYVNHLCSIGYTKSEIFSVTHRNVSCHAIMQMNRGFSLNYPSILVIFTDGMRRKMFSRRVTNVGSPNSIYSVKVMAPQGVKVIVKPKKLVFKQINQSLSYRVWFISRKRVKKGDDSMNFAEGHLTWIHSQNVHVSGLSSFYFDLWSRSVALKDKFGRVFSLSGNKLVLVDDVFKSGVGLSGGS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50974g00001 265 ProSitePatterns Serine proteases, subtilase family, serine active site. 3 13 IPR023828 -
Trme50974g00001 265 Gene3D - 88 221 - -
Trme50974g00001 265 Pfam Subtilase family 1 63 IPR000209 GO:0006508|GO:0008236
Trme50974g00001 265 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 211 IPR045051 -
Trme50974g00001 265 Pfam Fibronectin type-III domain 120 213 IPR041469 -
Trme50974g00001 265 Gene3D Peptidase S8/S53 domain 1 84 IPR036852 GO:0004252|GO:0006508
Trme50974g00001 265 ProSiteProfiles Serine proteases, subtilase domain profile. 1 71 - -
Trme50974g00001 265 SUPERFAMILY Subtilisin-like 1 110 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50974g00001 Trme-Chr50974 29 898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50974g00001 1 214 Subtilisin-like Serine Gene Family AT1G04110 62.150 1.01e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50974g00001 - - vvo:131622287 378.252