Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme509006g00001 GGGATTAGCCCTTCAGAGATGGACTTTGATAAGCGCGAGATTCCCTTCATCACAATGTCTGGAACATCCACGTCATGTCCTCATGTGGCTGGAATTGTTGGCCTTCTCAAGACTCTCCACCCTGACTAG 129 0.4961 GISPSEMDFDKREIPFITMSGTSTSCPHVAGIVGLLKTLHPD 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme509006g00001 42 ProSiteProfiles Serine proteases, subtilase domain profile. 1 42 - -
Trme509006g00001 42 Gene3D Peptidase S8/S53 domain 8 42 IPR036852 GO:0004252|GO:0006508
Trme509006g00001 42 Pfam Subtilase family 14 41 IPR000209 GO:0006508|GO:0008236
Trme509006g00001 42 SUPERFAMILY Subtilisin-like 15 42 IPR036852 GO:0004252|GO:0006508
Trme509006g00001 42 ProSitePatterns Serine proteases, subtilase family, serine active site. 21 31 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme509006g00001 Trme-Chr509006 90 218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme509006g00001 4 41 Subtilisin-like Serine Gene Family AT5G59810 65.789 2.09e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme509006g00001 - - gmx:100794732 80.4925