Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50799g00001 GGCGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGCGGTGGTCAGAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGCTCGTGTTTGATGACCCCCTAAGTGCTCTGGATGCACATGTGGCTAGACAGGTTTTTGATAAATGTATCAAGGGAGAATTGAGAGGGAAGACTCGGGTTCTTGTTACGAATCAGCTGCATTTCCTTTCACAGGTTGATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAAGGGACTTTTGAGGAACTCTCTAGCCAGGGGATTTTGTTCCAAAAGCTGATGGAAAATGCGGGTAAAATGGAGGAGTATGAAGAAGAAAAGGTAGATATTGAAGCTACAGATCAAAAGTCCTCTTCGAAACCAGTGGTCAATGGAGAGGTTAATGATCATGCAAAGAGTGAAAGTAAACCAAAAGTTGGAAAATCTATCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTT 517 0.4294 GGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVLVFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSSQGILFQKLMENAGKMEEYEEEKVDIEATDQKSSSKPVVNGEVNDHAKSESKPKVGKSILIKQEERETGVVS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50799g00001 172 Pfam ABC transporter 7 41 IPR003439 GO:0005524
Trme50799g00001 172 Coils Coil 109 129 - -
Trme50799g00001 172 Gene3D - 1 138 IPR027417 -
Trme50799g00001 172 MobiDBLite consensus disorder prediction 120 172 - -
Trme50799g00001 172 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 172 - -
Trme50799g00001 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 111 IPR027417 -
Trme50799g00001 172 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50799g00001 Trme-Chr50799 262 951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50799g00001 2 99 Calmodulin-binding Proteins AT2G36910 35.714 8.13e-15 69.7