Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50735g00001 ATGTTCTATAAGCATTTCAACTTTGTTGTAGACTTTAAAAATCATTCAAAAGGATTGTCTGCTGGAGTTATTGTTGGAATTGTGGCTGCATCATGTATGCTTGTCATATTGATACTGGTTACCCTTTGGAAGATGAGTTTCATTGGCAGAAAAGATGTAAGAGACAAAGAACTTCTTGATCTGAAAACTGGTTATTTCAGCTTAAGACAAATTAAAATAGCCACTAATGACTTTGACCCTGCAAATAAGATTGGTGAAGGGGGATTTGGACCAGTATACAAGGGTATTCTGTCAGATGGTGATGTCATTGCTGTTAAGCAACTCTCCTCCAAATCAAATCAAGGGAACCGTGAATTTGTTAATGAAATCGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGTTGTTGTATTGAAGGAAAGCAGTTGCTGCTGGTATATGAATACATGGAAAACAATTGTCTTGCGCGTGCACTTTTTGGTGAATGCCTCATAAACAACAATACCTTGTGA 525 0.3714 MFYKHFNFVVDFKNHSKGLSAGVIVGIVAASCMLVILILVTLWKMSFIGRKDVRDKELLDLKTGYFSLRQIKIATNDFDPANKIGEGGFGPVYKGILSDGDVIAVKQLSSKSNQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLVYEYMENNCLARALFGECLINNNTL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50735g00001 174 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Trme50735g00001 174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 164 - -
Trme50735g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 59 167 IPR011009 -
Trme50735g00001 174 ProSiteProfiles Protein kinase domain profile. 78 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme50735g00001 174 Pfam Protein tyrosine and serine/threonine kinase 82 163 IPR001245 GO:0004672|GO:0006468
Trme50735g00001 174 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 49 153 - -
Trme50735g00001 174 Gene3D Phosphorylase Kinase; domain 1 42 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50735g00001 Trme-Chr50735 14 912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50735g00001 7 165 Receptor kinase-like Gene Family AT1G53440 69.325 1.97e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme50735g00001 PK_Tyr_Ser-Thr 2.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50735g00001 - - gmx:100817368 271.937