Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50730g00001 ATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGGACAGGTAGTGTAACAATTGTTGGTGCTGTTTCTCCACCTGGAGGAGATTTCTCAGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAGCTTGCACAGAGGAAGCACTTTCCTTCTGTTAACTGGCTTATATCTTATTCAAAATACTCGACGGCACTTGAATCCTTTTATGAGCAATTTGATCCAGATTTCATAAACATTAGGACAAAGGCTCGTGAAGTGCTGCAAAGAGAAGATGATCTGAATGAAATTGTCCAGGTGTGTTCCCTTGCTTGA 399 0.4361 MPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQVCSLA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50730g00001 132 ProSitePatterns ATP synthase alpha and beta subunits signature. 79 88 IPR020003 GO:0005524
Trme50730g00001 132 Gene3D - 1 91 IPR027417 -
Trme50730g00001 132 Gene3D - 92 130 IPR024034 -
Trme50730g00001 132 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 88 IPR000194 GO:0005524
Trme50730g00001 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 92 IPR027417 -
Trme50730g00001 132 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 128 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50730g00001 Trme-Chr50730 52 751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50730g00001 1 129 Primary Pumps ATPases(2) AT1G78900 96.899 6.47e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50730g00001 K02145 - qsa:O6P43_028021 259.225