Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme507259g00001 GCACGGGAACTGGATGAAGTTCAACGAATGAGGAGCACTCAAGATTCCTTTGTCAAACTTGTTGGTGGTATTGCTCCAACGGTTTTTGGTCATCGAGAAGTAAAGCATGCAATCCTTCTTTTGCTTGTTGGTGGTGTCCACAAATCTACTCATGAAGGCATCAATCTTAGAGGGGACATAAATGTTTGTATTGTTGGAGATCCAAGTTGTGCAAAGTCTCAATTTCTT 228 0.4167 ARELDEVQRMRSTQDSFVKLVGGIAPTVFGHREVKHAILLLLVGGVHKSTHEGINLRGDINVCIVGDPSCAKSQFL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme507259g00001 76 Gene3D - 2 76 IPR027417 -
Trme507259g00001 76 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 3 76 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme507259g00001 76 ProSiteProfiles MCM family domain profile. 16 76 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme507259g00001 76 Pfam MCM P-loop domain 4 76 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme507259g00001 Trme-Chr507259 53 280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme507259g00001 1 76 Core DNA Replication Machinery Family AT5G44635 77.632 5.29e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme507259g00001 K02542 - nnu:104599804 129.798