Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50688g00001 GTATTAGAGGCAAGGGCTGGATTTTATGAAAAGCCAATTGCTACTTTAGATTTTGCTTCCTTGTATCCGTCTATTATGATGGCATATAATTTATGTTATTGCACACTGGTGACCCCTGAAAATGCACGCAATCTCAACATCCCTCCAGAGTCAGTGAACAAAACACCATCTGGTGAAACATTTGTTAAATCAAATTTACAAAAGGGTATACTTCCTGAAATTCTTGAAGAGCTATTAGCAGCCCGAGGCAAAGGATCCCCTTGA 264 0.3939 VLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPENARNLNIPPESVNKTPSGETFVKSNLQKGILPEILEELLAARGKGSP 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50688g00001 87 Pfam DNA polymerase family B 1 83 IPR006134 GO:0000166|GO:0003677
Trme50688g00001 87 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 1 83 - -
Trme50688g00001 87 SUPERFAMILY DNA/RNA polymerases 1 82 IPR043502 -
Trme50688g00001 87 Gene3D Palm domain of DNA polymerase 1 85 IPR023211 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50688g00001 1 85 Core DNA Replication Machinery Family AT5G63960 84.706 1.05e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50688g00001 K02327 - sind:105178056 150.599