Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50564g00001 ATGCGTGATGTAGGGATCACTCCTGAGTTTCGAAGCTTCAACGACGACGGATTTGGTCCTCCGCCCTCCAAATGGAAAGGAACTTGTGACAAATTTGTTAATTTCTCAGGCTGCAATAACAAGATAATTGGAGCCAAATACTTCAAACTTGATGGAAGATCTGAACAATCTGATATATTATCTCCCATAGATGTGTCAGGGCATGGAACTCATACAGCATCAACAGCAGCAGGCAGTCTCGTCTCAAATGCGAGTTTTTTTGGATTAGCAAACGGGACTGCTCGCGGGGCGGTGCCTTCGGCAAGGTTAGCAATTTACAAAGTGTGCTGGAAAGAGGATGGATGTGCTGATATGGATGTACTTGCTGCATTTGAGGCAGCTATACATGATGGTGTGGATGTCATATCCATTTCCTTAGGTGGAGAAGATTCAAATTATATTAAGGACCCTATATCGATTGGTGCATTTCATGCCATGAGGAAAGGTATAATCACTGTCGCCTCGGCTGGAAATGATGGTCCAACTATGGCAACTGTCGTAAATAATGCGCCGTGGATTGTCACGGTAGCTGCTAGTGGCATTGATAGGGACTTCCATAGTACTGTAGAGTTGGGGACTAGAACAAATGTTTCT 633 0.4439 MRDVGITPEFRSFNDDGFGPPPSKWKGTCDKFVNFSGCNNKIIGAKYFKLDGRSEQSDILSPIDVSGHGTHTASTAAGSLVSNASFFGLANGTARGAVPSARLAIYKVCWKEDGCADMDVLAAFEAAIHDGVDVISISLGGEDSNYIKDPISIGAFHAMRKGIITVASAGNDGPTMATVVNNAPWIVTVAASGIDRDFHSTVELGTRTNVS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50564g00001 211 ProSiteProfiles Serine proteases, subtilase domain profile. 1 211 - -
Trme50564g00001 211 SUPERFAMILY Subtilisin-like 35 207 IPR036852 GO:0004252|GO:0006508
Trme50564g00001 211 Gene3D Peptidase S8/S53 domain 1 211 IPR036852 GO:0004252|GO:0006508
Trme50564g00001 211 Pfam Subtilase family 64 195 IPR000209 GO:0006508|GO:0008236
Trme50564g00001 211 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 207 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50564g00001 Trme-Chr50564 107 921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50564g00001 3 205 Subtilisin-like Serine Gene Family AT4G00230 68.966 1.18e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50564g00001 - - vvo:131620061 372.859