Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50559g00001 ATGAGTATTTTAGGTTTCAGGAAGGTCGACCCAGATCGCTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCACTTACTTAAGAGTATAACTCGACGAAAGCCTGCTCATGGTCCTAATAATCAACAGGCTCAGCAACCTCATGGACAGAGTTCATCAGTAGGGGCATGTGTAGAAGTCGGGAAATTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGACAAGAATGTTCTGATGCAAGAGCTTGTGAGGTTGAGACAGCAGCAACAAACCACTGATGGCCAGCTACAAACAATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAACAGCAAATGATGTCATTCCTTGCCAAAGCTGTCCAGAGCCCTGGATTCTTTGCTCAGTTTGTGCAACAGCAAAATGACAGCAATAGGCGCATAACTGAAGTCAATAAAAAGCGGCGGCTCAAGCAGGATGGTATTGCCGAAACAACAGAGCGAGCTGCCCCTCCTGATGGACAAATTGTTAAGTATCAACCTCTGATGAATGAAACAGCAAAAGCAATGCTAAGGAAGATCATGAAATGGGATACTCCTCGTGTAGAATCTTTTAGTAAAAACCCTGATAATTACTTGATTGGAGACGGTACATCACCGTCAAGTGCAATGGACAGTAGTAGCTCATCGAGCTGGAATTCCGGAGTAAC 698 0.4527 MSILGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGPNNQQAQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDGQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQDGIAETTERAAPPDGQIVKYQPLMNETAKAMLRKIMKWDTPRVESFSKNPDNYLIGDGTSPSSAMDSSSSSSWNSGVT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50559g00001 233 MobiDBLite consensus disorder prediction 37 55 - -
Trme50559g00001 233 MobiDBLite consensus disorder prediction 207 233 - -
Trme50559g00001 233 Coils Coil 64 91 - -
Trme50559g00001 233 MobiDBLite consensus disorder prediction 198 233 - -
Trme50559g00001 233 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 215 IPR027725 -
Trme50559g00001 233 MobiDBLite consensus disorder prediction 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50559g00001 Trme-Chr50559 1 768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50559g00001 1 233 HSF AT1G32330 66.387 3.43e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50559g00001 K09419 - gmx:100794897 357.451