Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme505260g00001 ATGCCTAATCAAAGTGACATAGAGAAGTTAAAATATTTAAAATATGTTGTGAAAGAAACATTGAGATTACACCCTCCTGGTCCATTTCTGCTTCCAAGAGAGTGTGGACAAGCATGTCAGATAAATGGGTATGATATACCTTTTAAAAGTAAAGTCATCGTGAATGTTTGGGCCATTGGAAGAGATCCAAATCACTGGACTGATCCAGAGAAGTTTCATCCTGAAAG 227 0.37 MPNQSDIEKLKYLKYVVKETLRLHPPGPFLLPRECGQACQINGYDIPFKSKVIVNVWAIGRDPNHWTDPEKFHPE 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme505260g00001 75 Pfam Cytochrome P450 2 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme505260g00001 75 PANTHER CYTOCHROME P450 71B11-RELATED 4 75 - -
Trme505260g00001 75 Gene3D Cytochrome P450 1 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme505260g00001 75 PRINTS E-class P450 group I signature 14 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme505260g00001 75 PRINTS E-class P450 group I signature 55 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme505260g00001 75 SUPERFAMILY Cytochrome P450 2 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme505260g00001 Trme-Chr505260 25 251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme505260g00001 4 75 Cytochrome P450 AT3G26230 61.111 7.27e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme505260g00001 - K13267 gmx:100813216 134.035