Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme505092g00001 ATGAACTCAAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTACTTGGAAGGGTCAGGCACAACAATTTATTGGGTCTTAGGGGCTATTGTGTTGGCGATGATCAACGTCTTATTGTCTACGATTACATGCCAAATCTCAGTCTGCTTTCTCATCTCCATGGCCAATTTACTGGTGAAGTGCAACTCAACTGGCAAAGGAGAATGAGCATCGCAATTGGCTCTGCTGAAGGCATTTT 239 0.4351 MNSKAEMEFAVEVEVLGRVRHNNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFTGEVQLNWQRRMSIAIGSAEGI 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme505092g00001 79 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Trme505092g00001 79 PANTHER OS01G0253100 PROTEIN 2 79 - -
Trme505092g00001 79 Pfam Protein tyrosine and serine/threonine kinase 3 78 IPR001245 GO:0004672|GO:0006468
Trme505092g00001 79 SUPERFAMILY Protein kinase-like (PK-like) 4 79 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme505092g00001 Trme-Chr505092 17 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme505092g00001 2 79 Trihelix Transcription Factor Family AT1G70460 47.436 5.33e-22 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trme505092g00001 PK_Tyr_Ser-Thr 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme505092g00001 - - gmx:100787687 153.68