Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50484g00001 ATGATGGCTGATAAACATGGACCAATTTTCACAATCAAACTTGGTTCATACAAAGTTCTTATACTTAGTAGCAGTGAAATGGCCAAAGAATGTTTTACTCTCCATGACAAAACATTCTCCACTAGACCCTATGTTGCAGCCTCAAAGCTAATGGGTTACAACTATGCTATGTTTGGTTTCACTCCTTATGGTCCTTATTGGCGTGAGATAAGAAAGTTAGCTACACTTGAGCTTCTTTCGAACCACNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNAGGTGTTTTGGTTGATATGAAGCAGTGGTTTGGTGATTTGACACAAAATATTGCTCTGAAAATGGTGGGAGGGAAGCCATATTATGGTGCTGGTGAAGGTGAAGGTAGGAAGTATAAGGAAGCTATGAGAGATTGGGTTTGTTTGTTTGGTGTGTTTGTGTTGTCTGATGCAATTCCATTTCTGGGTTGGTTAGATATTAATGGTCATGAGAAGGCTATGAAGAAAACTGCTAAGAAATTAGACACTCTGGTTGAAGGGTGGCTAGAGGAACACAAAAAGAAAAGAGCTTTGGGTAAGAATGGAGAGGAAGAACAAGATTTCATGGATATCATGTTGAATGTTCTGCAGGATGCAGAGATWTGTGGTTATGATTCTGATACCATCATCAAGGCTACTTGCCTGGTATGTTTTCAGCTATAG 762 0.3451 MMADKHGPIFTIKLGSYKVLILSSSEMAKECFTLHDKTFSTRPYVAASKLMGYNYAMFGFTPYGPYWREIRKLATLELLSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLVDMKQWFGDLTQNIALKMVGGKPYYGAGEGEGRKYKEAMRDWVCLFGVFVLSDAIPFLGWLDINGHEKAMKKTAKKLDTLVEGWLEEHKKKRALGKNGEEEQDFMDIMLNVLQDAEICGYDSDTIIKATCLVCFQL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50484g00001 253 Pfam Cytochrome P450 2 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50484g00001 253 Gene3D Cytochrome P450 1 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50484g00001 253 PRINTS E-class P450 group I signature 3 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50484g00001 253 PRINTS E-class P450 group I signature 27 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50484g00001 253 PANTHER CYTOCHROME P450 82C3-RELATED 2 250 - -
Trme50484g00001 253 SUPERFAMILY Cytochrome P450 2 249 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50484g00001 Trme-Chr50484 31 792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50484g00001 2 248 Cytochrome P450 AT4G31940 38.672 5.11e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50484g00001 - - vvo:131650056 380.563