Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50478g00001 ATGATGGGAAGCCAAACAACAGAACAAGGAGATTGTTCGAAATTCAAAGCAGGAACTCCACATTGTTGTAAGAAAGATCCAACGGTAGTTGATATGTTGCCGGGAACTCCTTACAACCAACAGATTGCAAATTGTTGCAAAGGTGGAGTCTTGAATTCATGGGCTCAAGATCCAAGCAATGCAGTAAGTTCTTTTCAACTTAGTGTTGGTTCTGCCGGAACAACCAATAAAACAGTTAAACTTCCAAGGAATTTCACACTCAGAGCACCTGGTCCTGGTTATACTTGTGGTCCTGCAAAAATTGTTAGACCAACTCAATTTATTACCAGTGATAAGAGGAGAGTGACACAAGC 353 0.4108 MMGSQTTEQGDCSKFKAGTPHCCKKDPTVVDMLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQLSVGSAGTTNKTVKLPRNFTLRAPGPGYTCGPAKIVRPTQFITSDKRRVTQA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50478g00001 118 Pfam COBRA-like protein 1 118 IPR006918 GO:0010215|GO:0016020
Trme50478g00001 118 PANTHER PROTEIN COBRA 1 118 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50478g00001 Trme-Chr50478 602 954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50478g00001 1 118 COBRA Gene Family AT5G60920 80.508 2.67e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50478g00001 - - lja:Lj1g3v0569370.1 235.343