Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme503238g00001 ATGCTTGTTGCTACACCTGGTAGGTTGCTGGATCATATTGAGAATAAGTCTGGAATATCTGTTCGATTGATGGGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTTGGGTTTCGAAAGGATATAGAAAAAATCGTTGATTGTTTGCCCCGGCAAAGGCAATCCTTGCTGTTTTCAGCAACCATGCCAAAGGAGGTTAGGTTAGGTTAG 222 0.4279 MLVATPGRLLDHIENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATMPKEVRLG 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme503238g00001 73 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 73 IPR014001 -
Trme503238g00001 73 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 2 70 - -
Trme503238g00001 73 Pfam DEAD/DEAH box helicase 1 70 IPR011545 GO:0003676|GO:0005524
Trme503238g00001 73 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 70 IPR027417 -
Trme503238g00001 73 Gene3D - 1 72 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme503238g00001 Trme-Chr503238 34 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme503238g00001 1 70 Eukaryotic Initiation Factors Gene Family AT1G72730 42.857 1.31e-11 56.2