Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50312g00001 GGTATAGAGTTTTCAATTGATTTTATGACACCAGCAGAGAAAATTGGAGCATTGAAAGAAAAAGTACAGAGGTACTTGGAGAGGAATCCACAATACTGGCATCCTAATTTTGGCTTGTTTGTGATAGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATAAACTTTCAAGATTTTGGGGAGAAGGTCAAACGGAAAAGTGATCTAGTGATGGAAGTAAAGAGAATATTTGAAGAGCTTAGTATCAGATACAACCTTCTTCCACAAGGTGTTCATCTCAGATACATGGAACCTGACACAAGTTATCTGAAATGA 333 0.3544 GIEFSIDFMTPAEKIGALKEKVQRYLERNPQYWHPNFGLFVIEIENVNKIKMGLYVTHTINFQDFGEKVKRKSDLVMEVKRIFEELSIRYNLLPQGVHLRYMEPDTSYLK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50312g00001 110 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 105 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50312g00001 Trme-Chr50312 1 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50312g00001 2 99 Mechanosensitive Ion Channel Family AT5G12080 51.020 1.24e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50312g00001 K22048 - gmx:100803107 177.948