Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme502648g00001 ACTACCATTAATTGGGCAATGGCTGAGATGATAAAGGATCCGAGAGTCTTGAAGAAAGCACGAGCTGAGGTGAGAGAGGGATTCTATAGAAGAGGAGGGGTTGATGAAGCCGCAATTGATGAGTTCAAATATTTGAAAGCAATAATCAAAGAGTCATTAAGATTACACCCTTCTGTTCCTCTCCTTCTTCCAAGGGAATGTGGACAAGTTTGTGAGATTGATAGAACACTGAATTAG 237 0.4093 TTINWAMAEMIKDPRVLKKARAEVREGFYRRGGVDEAAIDEFKYLKAIIKESLRLHPSVPLLLPRECGQVCEIDRTLN 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme502648g00001 78 PANTHER OS08G0105600 PROTEIN 1 74 - -
Trme502648g00001 78 Pfam Cytochrome P450 1 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme502648g00001 78 Gene3D Cytochrome P450 1 77 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme502648g00001 78 SUPERFAMILY Cytochrome P450 1 74 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme502648g00001 78 PRINTS E-class P450 group I signature 3 29 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme502648g00001 78 PRINTS E-class P450 group I signature 46 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme502648g00001 Trme-Chr502648 3 239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme502648g00001 2 66 Cytochrome P450 AT3G26230 50.746 2.38e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme502648g00001 - - lja:Lj0g3v0161499.1 116.701