Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50183g00001 ATGGTAGAGAAGTTATTGAAGGAGGGGATGAGGGTTTTATTGTATCAAGGTCAGCGCGATTTGAGGGTCGGCGTGGTTCAAGTCGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATTGTTGAGTATGTGAATGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCATTTACTAATGTTGTGGTTTTAGGGGGTGGACATCTTTTGCCTACTGATCAACCTTTGAATTCTCAAGCTATGATWGAAGATTGGGTTTTGGAAAAGGACAGAGAAGGTCGACAAGGGGCCGTGGGGGAGACGAGCGAAGGTAGCGAGTGA 348 0.4598 MVEKLLKEGMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIVEYVNAEREIWKVNGEVAGYVQKWKSFTNVVVLGGGHLLPTDQPLNSQAMIEDWVLEKDREGRQGAVGETSEGSE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50183g00001 115 Gene3D alpha/beta hydrolase 1 100 IPR029058 -
Trme50183g00001 115 Pfam Serine carboxypeptidase 2 95 IPR001563 GO:0004185|GO:0006508
Trme50183g00001 115 SUPERFAMILY alpha/beta-Hydrolases 2 96 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50183g00001 8 95 Calmodulin-binding Proteins AT2G22960 28.090 1.14e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50183g00001 K09645 - gmx:100780822 162.925