Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50152g00001 GGTCACATAAACCCAGCAGTGACATTCGGTTTGTTCTTGGCAAGGAAATTGTCTCTGACTAGGGCGGTGTTCTACATCGTGATGCAGACCCTTGGTGCTATCGCTGGTGCTGGTGTGGTTAAGGGTTTTGAGGGAAAGACTTTGTACGGTAAATTCAACGGTGGTGCCAACTTTGTTGCTCCCGGTTACACAAAAGGTGATGGACTTGGTGCTGAGATTGTTGGTACCTTTGTTCTTGTCTACACCGTTTTCTCTGCCACTGATGCCAAGCGGAGCGCCAGAGACTCACACGTTCCTCTTTTACCATCTGAGCTGTACTTAGGAGACTGGTCGACCGTTCTTTAA 345 0.487 GHINPAVTFGLFLARKLSLTRAVFYIVMQTLGAIAGAGVVKGFEGKTLYGKFNGGANFVAPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPLLPSELYLGDWSTVL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50152g00001 114 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme50152g00001 114 PRINTS Major intrinsic protein family signature 71 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme50152g00001 114 ProSitePatterns MIP family signature. 2 10 IPR022357 -
Trme50152g00001 114 SUPERFAMILY Aquaporin-like 1 101 IPR023271 -
Trme50152g00001 114 Gene3D Glycerol uptake facilitator protein. 1 107 IPR023271 -
Trme50152g00001 114 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 101 IPR034294 -
Trme50152g00001 114 Pfam Major intrinsic protein 1 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50152g00001 Trme-Chr50152 381 860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50152g00001 1 101 Major Intrinsic Protein MIP AT1G01620 84.158 1.00e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50152g00001 K09872 - gmx:100791447 189.504