Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50136g00001 GTGAATAGGGCGAAGACTAAAATTGAAAAGGTTCATAGAGAAATCGATATGATAATGCAAGACATCATCGACGATCACAAAAGCAGTCTCAAGGAAGCAAATAAGGATGAAGATCTAGTTGATGTTCTTCTCAAGATTCAACAAGAAAATGATCAGTCACAACATCCCTTGACTGATGATTATTTCAAATCAATCATTCAGGACATGTTTGGTGCTGGTAGTGAAACATCATCAGGGATTGTTTTATGGGGGATGTCACAAATTATAAAAAATCCAAAGGTAATGGAAAAAGCACAAGTTGAGGTAAGAAGAGTGTTTGATAAAAAGGGGTATGTTGATGAGACAGAGATGCACCAATTGATATACTTAAAGTCTATCATCAAAGAGACACTGAGATTGCATCCTGCTGTACCATTGTTGGTTCCGAGAGAAAGCAGGAAGCGATGCCAAATCAATGGTTATGATATTCCAATTAAGACAAGGGTTGCTGTCAATGTTTGGGCAATTGGAAGAGATCAAAGGTATTGGGTTGAAGC 536 0.3769 VNRAKTKIEKVHREIDMIMQDIIDDHKSSLKEANKDEDLVDVLLKIQQENDQSQHPLTDDYFKSIIQDMFGAGSETSSGIVLWGMSQIIKNPKVMEKAQVEVRRVFDKKGYVDETEMHQLIYLKSIIKETLRLHPAVPLLVPRESRKRCQINGYDIPIKTRVAVNVWAIGRDQRYWVEA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50136g00001 179 PRINTS E-class P450 group I signature 165 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 PRINTS E-class P450 group I signature 81 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 PRINTS E-class P450 group I signature 61 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 SUPERFAMILY Cytochrome P450 6 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 Coils Coil 1 21 - -
Trme50136g00001 179 PANTHER OS08G0105600 PROTEIN 2 179 - -
Trme50136g00001 179 Gene3D Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme50136g00001 179 Pfam Cytochrome P450 4 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50136g00001 Trme-Chr50136 230 956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50136g00001 8 176 Cytochrome P450 AT1G13110 41.279 5.32e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50136g00001 - - mtr:11442302 280.411