Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme50104g00001 CATCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCAAAACTTTATCCCCAGAAGGACAGGATTTCCTTGAGCAGTGTTTCCGAAGGAATCCTGCAGAACGACCATCTGCAGCGGTGCTTCTGACACATGCCTTTGTGCAAAATTTGCATGATCAAGATATTATAGTTCATTCACAAGTATGTCATAAAGAAGACACCATAGTTCATTCACAAGGATGTCATAAAGAAGACATTGGACCCAAAGATGAACCGCGTAAACACAGTCCAGGACACAGTTCAAAACATAGCCGTGGTGTAGGGCCAGCTTCCTTTCGTGCACGANTTTTTTGCAAAATTCAAAATTTAATCGGTGACACTTCCAAAAAAGCTGATACCGAGGAATCTAATCACATTAGATCTTCTCCTGTATCTCCTTGCTCGCTGACTGAAGTTAACAGTCCTCAATCTCCCTTTAATCCTAATAACCGCAATTGCATGACCGTTTCCAAACCCTCCAACATACCCTTCACGATTATGAGAATCGTGAAGCA 539 0.4286 HQAMFKVLHRSPDIPKTLSPEGQDFLEQCFRRNPAERPSAAVLLTHAFVQNLHDQDIIVHSQVCHKEDTIVHSQGCHKEDIGPKDEPRKHSPGHSSKHSRGVGPASFRARXFCKIQNLIGDTSKKADTEESNHIRSSPVSPCSLTEVNSPQSPFNPNNRNCMTVSKPSNIPFTIMRIVK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme50104g00001 179 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
Trme50104g00001 179 MobiDBLite consensus disorder prediction 74 92 - -
Trme50104g00001 179 MobiDBLite consensus disorder prediction 123 157 - -
Trme50104g00001 179 MobiDBLite consensus disorder prediction 133 157 - -
Trme50104g00001 179 SUPERFAMILY Protein kinase-like (PK-like) 3 61 IPR011009 -
Trme50104g00001 179 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 61 - -
Trme50104g00001 179 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme50104g00001 Trme-Chr50104 221 957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme50104g00001 3 51 MAP Kinase Kinase Kinase AT5G66850 63.265 2.51e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme50104g00001 - K04420 gmx:100781764 223.402