Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49833g00001 ATGATCAAGTTGCTCTTTCAAAACCTTCTTTTTCAATCACTTTTTGTCAATCTTTTCTCTCTTACTATAATCCTTATCTATCTACATTGTGGTAATGCTGTGAATCTACCAAACAATGAAACAGTTCCAGCACTCTTTGTGTTTGGTGATTCTGTAGTTGACTCAGGTAATAACAACTACATCAATACCATTATCAAGTGCGATTTTCCACCTTATGGTCAAGACTTTGGTAGTGGAAATCAACCAACTGGAAGATTCAGCAATGGTTTAGTCCCTTCAGACATCATCGCTTCAAAATTTGGAGTGAAGAAGCTTTTGCCAGCTTATCTTGATCCAAAGTTGCAACTTGAAGATCTTCTAACAGGTGTAAGCTTTGCCTCTGGTGGTGCTGGATATGATCCTCTAACTTCTGAATTAGCAGTAAATAACTATGTCTAA 438 0.3699 MIKLLFQNLLFQSLFVNLFSLTIILIYLHCGNAVNLPNNETVPALFVFGDSVVDSGNNNYINTIIKCDFPPYGQDFGSGNQPTGRFSNGLVPSDIIASKFGVKKLLPAYLDPKLQLEDLLTGVSFASGGAGYDPLTSELAVNNYV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49833g00001 145 Pfam GDSL-like Lipase/Acylhydrolase 45 134 IPR001087 GO:0016788
Trme49833g00001 145 PANTHER GDSL ESTERASE/LIPASE EXL3 20 139 - -
Trme49833g00001 145 Gene3D SGNH hydrolase 31 144 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49833g00001 Trme-Chr49833 199 884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49833g00001 21 139 Pollen Coat Proteome AT1G75910 50.420 9.75e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49833g00001 - - ahf:112723705 200.675