Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49750g00001 ATGGCAGTCAGCTACACAGCTATGCTTGAAGATGGCACTGTATTTGAGAAAAGAGGAATCAGTGAAACACAGCCCTTGAAATTCATAATTGATGAGGAACAAGTTATTACTGGTCTAGACCGAGCAGTGGCAACAATGAAG 141 0.4184 MAVSYTAMLEDGTVFEKRGISETQPLKFIIDEEQVITGLDRAVATMK 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49750g00001 47 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 3 47 IPR001179 GO:0003755
Trme49750g00001 47 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 47 IPR001179 GO:0003755
Trme49750g00001 47 SUPERFAMILY FKBP-like 3 47 - -
Trme49750g00001 47 Gene3D - 1 47 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49750g00001 Trme-Chr49750 1 263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49750g00001 1 47 Calmodulin-binding Proteins AT3G25230 52.083 1.47e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49750g00001 K09571 - gmx:100798382 81.6481