Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49704g00001 GATGTTATGATTCTCGACCATTCAATGTTTTCTGGGATTGCTGATATGCATGATCGACACAGGGATATGCGGCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCCCTGGAAGAACGCATCGGAAACGTGAGTACAGGATTGAATGAGGAGACCATTATGAAACATTTGAAACTGAAGAAATATTCAGTTGATGAATCAGGTTCTCAGAATGAAGCAGAACCCTGCTGTGTTTGTCAG 243 0.4115 DVMILDHSMFSGIADMHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLNEETIMKHLKLKKYSVDESGSQNEAEPCCVCQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49704g00001 81 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 81 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49704g00001 Trme-Chr49704 22 369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49704g00001 1 81 C3H Transcription Factor Family AT2G15530 58.333 7.43e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49704g00001 - - psat:127091144 147.132