Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49679g00001 ATGGATGAGCCTATTTTAGATGCAATTTGTGAGAGACTAAGACAGAAGACATACATAAGTGGAAGTAGAGTTATGAGTCAAGGTGGTGTAGTCGAGAAGATGGTGTTTGTTGTTCGTGGAAAATTGGAGAGTGTTAATGGTGAAAATGGAATTGGAATTTCTTTAGCTGAAGGAGATGCTTGTGGTGAAGAACTTCTTACATG 203 0.3842 MDEPILDAICERLRQKTYISGSRVMSQGGVVEKMVFVVRGKLESVNGENGIGISLAEGDACGEELLT 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49679g00001 67 SUPERFAMILY cAMP-binding domain-like 1 67 IPR018490 -
Trme49679g00001 67 Gene3D Jelly Rolls 1 67 IPR014710 -
Trme49679g00001 67 ProSiteProfiles cAMP/cGMP binding motif profile. 1 67 IPR000595 -
Trme49679g00001 67 CDD CAP_ED 1 66 IPR000595 -
Trme49679g00001 67 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49679g00001 1 67 Ion Channels AT3G17700 67.164 1.60e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49679g00001 K05391 - lja:Lj1g3v2646140.1 114.775