Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49593g00001 ATGGCGTTATCAACTCCACAGATACAAAGATTTCTTTTAACCAAACTCCATAGACGYTACTMCTCCACCTCTTCCAAATCCAAMAACTTWAACAGAAACAACAGAAACATCTTCAACASCAGAAGAAGTCGTTGCTACTCTGCCATAGCCATTGATGCACCTTCATCATTGACAGAYTCACCTCCTATTAGATGGGGTTCTGTTTCTTTGCAGGGTCCTCGTGAAGAAATGGAAGATGATATTATTCTCAGACCTGATAGTCTTCAAGGTTTTTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGCTTTGCTTCTGTCCAGTTTCTCAGGTCTTTGCAATAG 342 0.4035 MALSTPQIQRFLLTKLHRRYXSTSSKSXNXNRNNRNIFNXRRSRCYSAIAIDAPSSLTDSPPIRWGSVSLQGPREEMEDDIILRPDSLQGFSFAAVFDGHGGFASVQFLRSLQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49593g00001 113 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Trme49593g00001 113 SUPERFAMILY PP2C-like 57 111 IPR036457 -
Trme49593g00001 113 Gene3D - 63 112 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49593g00001 1 110 PP2C-type Phosphatase Gene Family AT4G27800 51.351 3.52e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49593g00001 K04457 - vum:124822920 136.346