Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49489g00001 ATGCACGTAGGGGCTGTACAACCTGGTGAAAGAGCCTTAGTCATAGATGATCTCATAGCCACTGGTGGAACCTTATGTGCTGCAATTAAACTTCTAGAACGTGTTGGGGTGAATGTTGTTGAGTGCGCTTGTGTGATTGAATTACCGGAGTTAAAG 156 0.4487 MHVGAVQPGERALVIDDLIATGGTLCAAIKLLERVGVNVVECACVIELPELK 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49489g00001 52 Gene3D - 1 52 IPR029057 -
Trme49489g00001 52 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 52 - -
Trme49489g00001 52 SUPERFAMILY PRTase-like 1 50 IPR029057 -
Trme49489g00001 52 CDD PRTases_typeI 1 52 IPR000836 -
Trme49489g00001 52 Pfam Phosphoribosyl transferase domain 9 49 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49489g00001 Trme-Chr49489 196 937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49489g00001 1 52 PRT Gene Family AT1G27450 86.538 7.19e-28 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49489g00001 K00759 - thj:104809810 102.064