Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49463g00001 GGAGTTCCAGAACAGAAACTTCGAGGTCACTTAGGTTCTTTTGGTGTAACTGGAAATCTTGCACTTCAACCTATGTATACTTTGTCAGGTGGTCAGAAAAGTAGAGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAACCATCCAATCATCTGGGAAAGTATGCTGAATCTATCGAGTTTGTGTTGTTTTGCATCATGTTTATTCTTATCTCTTCTCATCTGAAAATGGTATCTGAACTCACATTCGAGTAA 273 0.3736 GVPEQKLRGHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLGKYAESIEFVLFCIMFILISSHLKMVSELTFE 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49463g00001 90 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 60 IPR027417 -
Trme49463g00001 90 Gene3D - 1 87 IPR027417 -
Trme49463g00001 90 Pfam ABC transporter 8 56 IPR003439 GO:0005524
Trme49463g00001 90 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 4 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49463g00001 Trme-Chr49463 460 883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49463g00001 28 65 Calmodulin-binding Proteins AT2G36910 47.368 9.32e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49463g00001 K06158 - ming:122061587 120.553