Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4943g00001 ATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCGATTCCTGATCATCTCTCTGCTGGGGCAAAAGATTTTCTGCTAAAGTGCTTGCAGAAGGAACCAATTTTGAGGCTATCAGCATCGGAACTGCTGCAGCATCCCTTTGTTACTGGTGAAAATATGGATTTGATTTCTCAGTCATCTACTGCCATGGGAAGTTTTAGAGCATCTTCACCATCATGTGCTCCAAATGTTGAATCCTTACTTTGCTCAACAGAAAATCCTCAGGACTCAGGAAATAATCATGTATGGGGAATGAACAATGATGATGACATGTGTGAGATTGATGACAAAGAAGAGTTCTCAGAGTGTAATATCAAATACAAATCATCAATGCCAGATAATATTGAGAGTTTTAACCCGATGTCTGAACCCTCGGATGATTGGGGCTGTAAATTTGATGCAAGTCCAGTACTGGAAAATAGAGAAGTTAGTTTGGACAATGATGAAAGTCACATGTCATGTGTTCAATTAGAGTCTAATAAGGAACAGAAAGATTTACCCTTTCCATGTGTGCCATCTCTGTCAGAAGACGATGATGACCTCACAGAGGTCAAAATTAAAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAGTTTAAATGCATCTTGTTCTCCCAATGTGATTGATAGCCCAAGTGATGATACCCCTGGTCGAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATGCCAATTAGCTCTCCATCTAAAGCAGTTGACAATGCTGGAAGTCCTGGAAGTAATGGCAGGTCCTCAGCAACTGTTGGCAATGTAAATAGTCATGGTTCACAGGATGTTCCAGCATCTCCCATTAATGAACGGAAAGGAATGGTAGTTGACTCCCAGCAGGAGCCCTTTAGCCCAAGGTTTTGTTTGTGTTCAATCTTTTACTTGCTTTGTTTTTCATAG 1056 0.4119 IEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPILRLSASELLQHPFVTGENMDLISQSSTAMGSFRASSPSCAPNVESLLCSTENPQDSGNNHVWGMNNDDDMCEIDDKEEFSECNIKYKSSMPDNIESFNPMSEPSDDWGCKFDASPVLENREVSLDNDESHMSCVQLESNKEQKDLPFPCVPSLSEDDDDLTEVKIKAFLDEKALELKKLQTPLYEEFFNSLNASCSPNVIDSPSDDTPGRKYLKLPPKSKSPSRMPISSPSKAVDNAGSPGSNGRSSATVGNVNSHGSQDVPASPINERKGMVVDSQQEPFSPRFCLCSIFYLLCFS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4943g00001 351 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
Trme4943g00001 351 PANTHER SERINE/THREONINE PROTEIN KINASE 1 149 - -
Trme4943g00001 351 MobiDBLite consensus disorder prediction 252 320 - -
Trme4943g00001 351 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Trme4943g00001 351 ProSiteProfiles Protein kinase domain profile. 1 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme4943g00001 351 MobiDBLite consensus disorder prediction 276 316 - -
Trme4943g00001 351 Pfam Protein kinase domain 1 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4943g00001 Trme-Chr4943 67 2107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4943g00001 1 333 MAP Kinase Kinase Kinase AT1G09000 44.324 1.64e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme4943g00001 Pkinase 3.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4943g00001 K20606 - gmx:100807537 492.656