Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49350g00001 ATGCATGATTTGTTACAAGAAATGGGACGGGATATTGTTAATCAGGAATCTAAAGATCCTGGAAAACGAAGTCGATTGTGGAAAGCTAAAGAAATATCTGATGGAACTGAAGCTGTGGAAGGTATAAGTATAACATTTGATGCATTTCATGGGAGCACATGCGATGTGTACTTTCCCGACGGTCTTGAGTGGCTTTCTGATAAATTGAGGTACCTTCAATGGGATGGATACTGCCTTGAGTCTTTGCCATCAACCTTTTGTGCTGAAATGCTTATAGAGCTTAGGATGACTCATAGCAAGCTTAGAAAGCTATGGGATGGAGTTCAG 327 0.4067 MHDLLQEMGRDIVNQESKDPGKRSRLWKAKEISDGTEAVEGISITFDAFHGSTCDVYFPDGLEWLSDKLRYLQWDGYCLESLPSTFCAEMLIELRMTHSKLRKLWDGVQ 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49350g00001 109 MobiDBLite consensus disorder prediction 1 25 - -
Trme49350g00001 109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 104 IPR044974 GO:0006952
Trme49350g00001 109 Pfam Leucine Rich Repeat 91 109 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49350g00001 Trme-Chr49350 75 614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49350g00001 1 107 WRKY Transcription Factor Family AT4G12020 40.580 1.21e-20 83.6