Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme493176g00001 ATGGAACCAGTTGAGAAGTGTTTGAGAGATGCTAAGATGGACAAAAAAAGTGTCCATGATGTTGTCCTTGTTGGTGGATCCACCAGAATTCCAAAGGTTCAACAACTTCTTCAAGATTTCTTTAATGGAAAGGAACTATGCAAGAGCATCAATCCTGATGAGGCTGTTGCATATGGTGCTGCTGTTCAGGCTGCAATCCTGAGCGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTCTTGGATGTTACCCCTCTATCTCTTGGT 267 0.4419 MEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme493176g00001 89 Gene3D - 48 65 - -
Trme493176g00001 89 PANTHER HEAT SHOCK PROTEIN 70KDA 1 89 IPR013126 GO:0005524|GO:0140662
Trme493176g00001 89 Gene3D - 1 47 - -
Trme493176g00001 89 FunFam Heat shock cognate 70 kDa protein 2 1 43 - -
Trme493176g00001 89 ProSitePatterns Heat shock hsp70 proteins family signature 3. 21 35 IPR018181 -
Trme493176g00001 89 FunFam heat shock 70 kDa protein-like 44 69 - -
Trme493176g00001 89 PRINTS 70kDa heat shock protein signature 18 34 - -
Trme493176g00001 89 PRINTS 70kDa heat shock protein signature 77 89 - -
Trme493176g00001 89 PRINTS 70kDa heat shock protein signature 50 70 - -
Trme493176g00001 89 SUPERFAMILY Actin-like ATPase domain 2 69 IPR043129 -
Trme493176g00001 89 Pfam Hsp70 protein 1 89 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme493176g00001 Trme-Chr493176 17 283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme493176g00001 1 89 Calmodulin-binding Proteins AT3G12580 98.876 2.75e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme493176g00001 K03283 - aew:130773562 145.206