Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49251g00001 ATGCAAAATTCAGAAAGTGAAAACAATGTTGTTTCGTCGCTTGATTCTCGTGATATTGTCCATTACAAAGATCCTTCTGTGAGAGTTGGTTCACCTTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGCATGGAAACCACAAACTCCCTGCTGAACGTCAAAACAATGACTCGAGAGGCAAAGCCATTTGTAAAGATAAAACTGGAATGAAATCTCCTAATAAGGATCATTTTTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTGTAAAAGGAAACAAGACTGGTATACATGAAAGTGGTTCTTCGAAGGAAAAAGTTTCGAACATATACATCGAAGCTAAGAAACATTTATCTGAGATGCTGGTAGATAATGGAGATGATAACACAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGAGCATAATTTTTTGACTACACATGCAAGATTATCCACTTCAGATAAAACTTGGGAGGTTAATGAAGATAGCTTGTCTCCCAAGCAAGACACCTATATTGAACAACCCGATCAGGAAACAAACAATTCAAGGAACCAATCAAGCNTTTGTGACAAAAGATCTAATGAAGAACCAGCAATTGAGTCAGACTCAACTCTCTCACATGATCTTGATCACGTTGATACTGCTGAAATCAGTTATGCTGTTAGAGACGAGATAGTTGCGGAAGGTACTAGTTTGAAGTGCATGATTTAA 804 0.3731 MQNSESENNVVSSLDSRDIVHYKDPSVRVGSPFSLTEIKRKLKHAIGKEKHGNHKLPAERQNNDSRGKAICKDKTGMKSPNKDHFFIEKIARPMFDVVKGNKTGIHESGSSKEKVSNIYIEAKKHLSEMLVDNGDDNTSISSRQIPKTLGRILSLPEYNFSPLGSPGGNLEHNFLTTHARLSTSDKTWEVNEDSLSPKQDTYIEQPDQETNNSRNQSSXCDKRSNEEPAIESDSTLSHDLDHVDTAEISYAVRDEIVAEGTSLKCMI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49251g00001 267 MobiDBLite consensus disorder prediction 186 238 - -
Trme49251g00001 267 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 253 - -
Trme49251g00001 267 MobiDBLite consensus disorder prediction 194 219 - -
Trme49251g00001 267 MobiDBLite consensus disorder prediction 220 238 - -
Trme49251g00001 267 MobiDBLite consensus disorder prediction 44 75 - -
Trme49251g00001 267 MobiDBLite consensus disorder prediction 51 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49251g00001 Trme-Chr49251 120 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49251g00001 28 211 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 41.304 1.18e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49251g00001 - - gmx:100783243 331.643