Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4922g00001 GATGATTCTCAACTGATCGACGAAATTGTGAAAGATGTTTGGAAATTGTTGTCCCTAAGGTATCCTAATGAACTGAAAGACATTATTGAAACTGATGAAAACAATAAAGATATTGAATCATTGGTGAAGAAACATCAAAGAATTGGAATATGGGGTTTGGGAGGAATGGGAAAGACAACTTTAGCAAAAAAATTATTTGCTAAGCACTTTGCCCAATATGACAGTGTATGCTTCTTGGAAAATGTAAGAGAAGATACAGAAAAGAATGGAGTAACACACGTACGTAATAAGCTTTTGTGTGAGTTATTAAGGCGATCGGTTACTGCATCTGAAGCTGTTGGACTTCACACATTCATTAAGAGGAGGTTAACTGGTAAAATGATTTTAGTAGTTCTTGATGATGTGGATGATACAGAACAACTAGATGATCTGTGTGGATATCTTGACGAACTTGGACCAGACAGTAGACTCATTATCACAACAAAAAATAGACATGTGCTTGTTGGAAGAGTTGATGAGATTCACCCGGTCAAAATGTGGAAGTTTCAAGAATCTTTGAAGCTTTTTAGTTTAGGAGCCTTCAAACAAGAACACCCTAAAGAAGGTTATGAAATCCTCTCGAAAAGGGCAGTTGCATATGCAAAAGGCATTCCATTAGCCTTAAAAGTTTTGGGTTCTCATTTGTTTTCTAGAGAACCTGATATCTGGGATTCTGAATTGACACATCTTGAGAAGAATGTGCAATCCTTGAGCAAAATTGAGAAAGTGTTAAAAGTGAGTTATGATGGATTAACAACACGGGAGAAGGAAATCTTTCTAGACATTGCGTTCTTTTTCAATGATGAAAAGAAAGATTTTGTTACAAGGATACTAGATGCATGTGGTTTCAATGCTACAAGTGGAATAAAACTTCTCGAAGAGAAAGCTCTTGTAACCATTTCAAATAGTAATAGAATACAAATGCATGACTTACTAAAAAAATTGGCTTTGCAGATAGTTCGGTACAAAGAATATTGTCTTCGTAGAGGACCAGAAGAGCGTAGTAGATTGTGTGATACTGAAGAAGTTCGTGATGTATTTAAAAGTAGAAAGGAAACTCATAAAGTTGAAGGCATACATTTTGATTTATCTCAAGATGTAAAATTAGATGTTCGAGTTGACACATTCAACAAGATGGAAGAATTAAGATTTCTTAGATTAAATGTTCCCTTGGGTAAGAAGAGATTGACTATTGTAAAAATTCCAGAAGATCTCATGTCATTTCCTGATAAATTGATGTATCTTGAGTGGAATGGTTACCCGTTAAAGACTCTTTCACAACCTTTTGTTGCTGAACTACTTGTTGAGATTCGTCTGCCGCATAGTGATGTTGAATATCTTTGGCACGAGAAGCAGGTGGGTATCCGTTGA 1410 0.3567 DDSQLIDEIVKDVWKLLSLRYPNELKDIIETDENNKDIESLVKKHQRIGIWGLGGMGKTTLAKKLFAKHFAQYDSVCFLENVREDTEKNGVTHVRNKLLCELLRRSVTASEAVGLHTFIKRRLTGKMILVVLDDVDDTEQLDDLCGYLDELGPDSRLIITTKNRHVLVGRVDEIHPVKMWKFQESLKLFSLGAFKQEHPKEGYEILSKRAVAYAKGIPLALKVLGSHLFSREPDIWDSELTHLEKNVQSLSKIEKVLKVSYDGLTTREKEIFLDIAFFFNDEKKDFVTRILDACGFNATSGIKLLEEKALVTISNSNRIQMHDLLKKLALQIVRYKEYCLRRGPEERSRLCDTEEVRDVFKSRKETHKVEGIHFDLSQDVKLDVRVDTFNKMEELRFLRLNVPLGKKRLTIVKIPEDLMSFPDKLMYLEWNGYPLKTLSQPFVAELLVEIRLPHSDVEYLWHEKQVGIR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4922g00001 469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 460 IPR044974 GO:0006952
Trme4922g00001 469 Pfam NB-ARC domain 38 262 IPR002182 GO:0043531
Trme4922g00001 469 SUPERFAMILY "Winged helix" DNA-binding domain 251 337 IPR036390 -
Trme4922g00001 469 Gene3D - 10 173 IPR027417 -
Trme4922g00001 469 Gene3D - 181 265 IPR042197 -
Trme4922g00001 469 PRINTS Disease resistance protein signature 47 62 - -
Trme4922g00001 469 PRINTS Disease resistance protein signature 122 136 - -
Trme4922g00001 469 PRINTS Disease resistance protein signature 214 228 - -
Trme4922g00001 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 275 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4922g00001 Trme-Chr4922 435 1947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4922g00001 2 466 WRKY Transcription Factor Family AT4G12020 35.518 2.76e-68 235