Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme491593g00001 ATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCACCGGCCGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGTGGTACTCCTATAACGGATCAAAGACTTTTACCTGCTGATGTTTTCGCTACTGGTGCGGGACATGTTAATCCTATTAAAGCTAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTTTG 261 0.4176 MSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTPITDQRLLPADVFATGAGHVNPIKANDPGLVYDIQPEDYVPYLCGL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme491593g00001 87 Gene3D Peptidase S8/S53 domain 1 80 IPR036852 GO:0004252|GO:0006508
Trme491593g00001 87 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 87 IPR045051 -
Trme491593g00001 87 SUPERFAMILY Subtilisin-like 1 73 IPR036852 GO:0004252|GO:0006508
Trme491593g00001 87 ProSiteProfiles Serine proteases, subtilase domain profile. 1 67 - -
Trme491593g00001 87 Pfam Subtilase family 1 40 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme491593g00001 Trme-Chr491593 23 283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme491593g00001 1 87 Subtilisin-like Serine Gene Family AT1G04110 65.517 2.10e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme491593g00001 - - gmx:100783595 172.17