Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme49129g00001 ATGATAGGGATTTGGGGGATGGGTGGATCAGGTAAAACAACAACAGTCACAGCTATCTACAACCAATTTCAATGCAAATTTGAGAATCACGGTTTCATTGAGAATATTAGAGAAGTCTGTAACGGAGGTGTTAAAGGGATTAAACAATTACAAAAACAACTTCTTGCAGATGTCCTGAAATCAAATGAGAAAATATACGGCACTGCATCCGGGATAACAACGCTTGAGAAAAGATTTATGGGGAAAAGGGCTCTCATTGTACTCGATGACGTGAGCACATTTGATCAAGTAGAGGCCCTGTGTGGAAATAGTAAATGTTTTGGTGCGGGAAGTGTATTGATTGTTACATCCAGGGATGTAAACATACTTAAGAAACTTGAAGTTGACTATATCTATAGCATAAAGGAAATGAACGAAATCAAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAGCCAAATCCAAAAGGAGAATTCAGTGAACTCTCAAGCAGCATAGTTGCTTACTGTAAAGGATTACCACTGGCTCTTGAAATCATTGGATGTTTCTTACATGACAGGACAGTACAAGAATGGGAAAGTACACTATCAACATTGGAGAAAATTCCTGATGGTCAAGTGCATAAGAAACTGAGAATAAGCTATGATGGTTTAAAGAACGATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTGAGGATAGAGCCTATGTTTCAG 733 0.3779 MIGIWGMGGSGKTTTVTAIYNQFQCKFENHGFIENIREVCNGGVKGIKQLQKQLLADVLKSNEKIYGTASGITTLEKRFMGKRALIVLDDVSTFDQVEALCGNSKCFGAGSVLIVTSRDVNILKKLEVDYIYSIKEMNEIKSLELFSWHAFRQPNPKGEFSELSSSIVAYCKGLPLALEIIGCFLHDRTVQEWESTLSTLEKIPDGQVHKKLRISYDGLKNDTEKDIFLDICCFFIGEDRAYVS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme49129g00001 244 PRINTS Disease resistance protein signature 78 92 - -
Trme49129g00001 244 PRINTS Disease resistance protein signature 1 14 - -
Trme49129g00001 244 PRINTS Disease resistance protein signature 171 185 - -
Trme49129g00001 244 Gene3D - 136 220 IPR042197 -
Trme49129g00001 244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 231 IPR027417 -
Trme49129g00001 244 Pfam NB-ARC domain 2 213 IPR002182 GO:0043531
Trme49129g00001 244 Gene3D - 1 131 IPR027417 -
Trme49129g00001 244 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 235 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme49129g00001 Trme-Chr49129 233 965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme49129g00001 2 243 WRKY Transcription Factor Family AT5G45050 36.626 2.64e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme49129g00001 - - tpra:123923845 381.333